API

• classify module
  • get_model_path()
  • parse_arguments()
  • validate_files()
  • load_proteins_from_file()
  • validate_data_integrity()
  • load_data()
  • preprocess_data()
  • integrate_protein_data()
  • initialize_protein_data()
  • prepare_adata_for_totalvi()
  • align_protein_data()
  • train_totalvi_model()
  • classify_latent_space()
  • save_results()
  • classify_cells()
  • main()